Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001671.1 Length=306 Score E Sequences producing significant alignments: (Bits) Value seq3173 176 8e-42 seq6178 150 3e-34 >seq3173 Length=1762 Score = 176 bits (194), Expect = 8e-42 Identities = 114/125 (91%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 1 CGAGGGTCTCAAGCGCGACCACCTGCTGGGCACCACCACCTGCGTCAAGGTGGAGCTCTA 60 |||||| || ||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 1638 CGAGGGACTGAAGCGCGACAACCTGCTGGGCGCCACCACCTGCGTCAAGGTGGAGCTCTA 1697 Query 61 TGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTGCTGGGCCT 120 |||||| | |||||||| ||||||||||||||||| ||||||||| | ||||||||||| Sbjct 1698 TGGCTCACTCGGCGCCACCGGCAAAGGCCACGGCAGTGACAAGGCCGTATTGCTGGGCCT 1757 Query 121 GGAAG 125 ||||| Sbjct 1758 GGAAG 1762 >seq6178 Length=847 Score = 150 bits (166), Expect = 3e-34 Identities = 95/103 (92%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 204 TGCTCGGTGAACACAGCATTGCGTTCAACGAGAAAGAACACCTGGCGATGATCCGCAAAC 263 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2 TGCTCGGCGAACACAGCATTGCGTTCAACGAGAAAGAACACCTGGCGATGATTCGCAAAC 61 Query 264 CCCTCGCCTACCATCCCAACGGCATGATCTTTCGTGCTTTCGA 306 |||| |||| |||||||||||||||||||| || || ||||| Sbjct 62 CCCTGCCCTATCATCCCAACGGCATGATCTTCCGCGCCTTCGA 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 876731837568