Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq4109 372 5e-101 >seq4109 Length=6470 Score = 372 bits (412), Expect = 5e-101 Identities = 266/306 (87%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 1 CGAGCTGGATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGC 60 ||||||||| || || |||||||||||||||||||||||||||| || ||||||||||| Sbjct 4477 CGAGCTGGACAACGTGGTGGAAATCGCCGTTGAAGACGAAGAGATCGTGCAGCGTATTGC 4418 Query 61 TGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAA 120 || ||||| || || || |||||||||||||| ||||||| ||||||||| ||||| || Sbjct 4417 CGGTCGTCGTGTTCACGAGGCCTCGGGCCGCGTCTACCACATCGTCTACAACCCGCCGAA 4358 Query 121 GGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGA 180 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct 4357 AGTCGCGGGCAAGGACGATGTCACCGGCGAAGACCTGGTGCAGCGTAAGGACGACACCGA 4298 Query 181 AGAAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTT 240 ||| ||||| ||||| |||||||| || |||||||| || |||||||||||||||||||| Sbjct 4297 AGAGACCGTGCGTCATCGCCTGTCGGTCTACCATTCCCAGACCAAGCCGCTGGTGGACTT 4238 Query 241 CTACCAGAAGCTGGCTGCTGCCCAGGGCAAGCCCAAGTACAGCCACGTTGAAGGCGTTGG 300 ||||||||| || | || |||||||||||||| |||||||||||| | ||||| || || Sbjct 4237 CTACCAGAAACTCTCGGCCGCCCAGGGCAAGCCGAAGTACAGCCACATCGAAGGTGTGGG 4178 Query 301 CTCGGT 306 ||||| Sbjct 4177 TTCGGT 4172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899130096192