Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001693.1 Length=610 Score E Sequences producing significant alignments: (Bits) Value seq3795 282 2e-73 seq4766 96.9 1e-17 >seq3795 Length=1936 Score = 282 bits (312), Expect = 2e-73 Identities = 374/514 (73%), Gaps = 4/514 (1%) Strand=Plus/Minus Query 12 CACCC-ACCCCGGTGTGGTGCGGCGACCTCCCCTACATCTGGGCCCATGGGAAATGGCAT 70 ||||| | || ||| ||||||||||| || ||||||||||||| || || |||||| Sbjct 1876 CACCCGAACCGGGTTTGGTGCGGCGATATCACCTACATCTGGGCGCAAGGTCGCTGGCAT 1817 Query 71 TACCTGGCTGTCGCGCTGGATCTTTGCTCGCGCCGGGTGGTGGCTTGGGCGTTGACCAGA 130 |||||||| || | ||||||||| | | | || ||| | | | |||||| | ||| | Sbjct 1816 TACCTGGCCGTGGTGCTGGATCTGTACACCCGGCGGACGATTGGCTGGGCGCTTTCCACA 1757 Query 131 CACCCCGGACGCCGATCTGGCTATGCGGGCGCTGGATATGGCTTACCAGCCTGCACGACG 190 | || ||| |||| |||| || ||| || || ||||| ||| ||| || || | Sbjct 1756 AAGCC-GGATGCCGCGCTGGTGATCAAGGCCCTCGACATGGCCTACGAGCA-GCGCGGCA 1699 Query 191 A-CCTCATGGTCTGCTGGTTCACTCGGATCAAGGGTCGCAGTATGCGAGTCGTTTATTTC 249 | || || ||| | |||| || ||||| || ||||| | || || | || | Sbjct 1698 AGCCACAGCAGGTGCGGTTTCATTCCGATCAGGGCAGCCAGTACACCAGCCGCCTGTTCC 1639 Query 250 GCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATGAGTCGCCGGGGAAATTGCTGGG 309 | |||||||| |||||||| || || |||||||||||||||||||| || ||||||| Sbjct 1638 GGCAGCGGCTATGGCGTTACCGGATCGAACAGAGCATGAGTCGCCGGGGGAACTGCTGGG 1579 Query 310 ACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAAACGGAGTGGATACCGACCACGG 369 | || |||| ||||||||| |||| |||||| ||||| | |||||||| || | || | Sbjct 1578 ATAACTCGCCGATGGAGCGCCTGTTTCGCAGCCTGAAATCAGAGTGGATTCCAGCGACTG 1519 Query 370 GTTACCGAACGGCTCAAGAAGCCCAGCGCGATATCAGCCAATTCTTAATGCATCGGTACA 429 |||||| ||||| ||||||||||| || |||||||| | | | ||||| || |||| Sbjct 1518 GTTACCTGACGGCCATGGAAGCCCAGCGGGACATCAGCCATTACCTGATGCACCGCTACA 1459 Query 430 ACTGGATTCGCCCCCATCGATTCAACGGTGGGCTGGCGCCAGCTCGGGCCGAAGAAAAAC 489 | ||||| | || |||| ||| || ||||| ||||||| ||| |||||||||| Sbjct 1458 AGTGGATCAGGCCACATCAGCACAATGGCGGGCTACCGCCAGCGGTGGCTGAAGAAAAAC 1399 Query 490 TTAACGTCGTGTCCGGGATTAGTTGACCACTACA 523 |||| |||||||| ||||||||||||| Sbjct 1398 TTAAACCACAATCCGGGATGGGTTGACCACTACA 1365 >seq4766 Length=5937 Score = 96.9 bits (106), Expect = 1e-17 Identities = 138/188 (73%), Gaps = 5/188 (3%) Strand=Plus/Plus Query 46 CATCTGGGCCCATGGGAAATGGCATTACCTGGCTGTCGCGCTGGATCTTTGCTCGCGCCG 105 |||||||||| | ||||||||||||||||| ||||||| |||||||| | | | ||| | Sbjct 2503 CATCTGGGCCGA-GGGAAATGGCATTACCTAGCTGTCGTTCTGGATCTCTACGCACGCTG 2561 Query 106 GGTGGTGGCTTGGGCGTTGACCAGACACCCCGGACGCCGATCTGGCTATGCGGGCGCTGG 165 | |||| | |||| || |||||| ||||| || ||||| | || |||| ||| Sbjct 2562 AATTGTGGGTAGGGCACTG-TCAGACA-GCCGGATGCGGATCTAGTCATCAAGGCGTTGG 2619 Query 166 ATATGGCTTACCAGC-CTGCACGACGACCTCATGGTCTGCTGGTTCACTCGGATCAAGGG 224 | ||||||||| ||| | | | | ||| | || |||||| || |||| |||| || Sbjct 2620 ACATGGCTTACGAGCAACGTTCTA-GGCCTTAAGGGCTGCTGTTTGACTCAAATCAGGGC 2678 Query 225 TCGCAGTA 232 ||||| || Sbjct 2679 TCGCAATA 2686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1846251975266