Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001702.1 Length=226 Score E Sequences producing significant alignments: (Bits) Value seq1979 313 3e-83 >seq1979 Length=9990 Score = 313 bits (346), Expect = 3e-83 Identities = 205/226 (91%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 1 CGACGATGAAACGGAAAATCCCGTAGAACAACGCGAACATGCCCGACACGGCCATGGTTG 60 ||||||| || ||||| ||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 8833 CGACGATAAAGCGGAAGATCCCGTAGAACAACGCGAACATCCCCGAAACGGCCATGGTTG 8774 Query 61 GGCGTGGCTTGCGCGAGAAGATGTAGAGGATAAGGAACAGCGCCACACCTTCCAACGCAA 120 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || | Sbjct 8773 GGCGTGGCTTGCGCGAGAAGATGTAGAGGATCAGGAACAGCGCCACGCCTTCCAGGGCGA 8714 Query 121 ACTGGTAGAGCTGCGACGGATGGCGCGGCAGTTGTGCCGGGTCGCTGAACGGGGGGAACA 180 ||||||| |||||||| || |||||||||| ||| ||||||||||||||||| ||||||| Sbjct 8713 ACTGGTACAGCTGCGAGGGGTGGCGCGGCAATTGCGCCGGGTCGCTGAACGGCGGGAACA 8654 Query 181 CCATCGCCCACGGCACATCGGTCGGCTTGCCCCACAACTCGGCGTT 226 |||| ||||||||||| || |||||||||||||||| |||||||| Sbjct 8653 CCATGGCCCACGGCACGTCAGTCGGCTTGCCCCACAGTTCGGCGTT 8608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 623953006170