Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001757.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq4125 394 2e-107 >seq4125 Length=3308 Score = 394 bits (436), Expect = 2e-107 Identities = 289/343 (84%), Gaps = 0/343 (0%) Strand=Plus/Minus Query 1 CGACGTTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGATCTTCT 60 ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 343 CGACGTTGGGGCTCTGGAAGCCGACGTCATAGATATGGAAGCCCAGGTGCATGATCTTCT 284 Query 61 GGTCCAGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCACNN 120 |||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| Sbjct 283 GGTCCAGGTGCAGGTACGGGTAGTTGCCGTCCACCGGCAGCGACGGCGCCAGTTTCACCA 224 Query 121 NNNNNNNNNNNNNNNNNNNCGCCACTTCACCGGCAGCGCGGGCCACGGCGAGGATCATGC 180 ||||||||||||||| ||||||||||||||||||||||||| Sbjct 223 CACCCACCAGCATCAGCGGCGCCACTTCACCGGCGGCGCGGGCCACGGCGAGGATCATGC 164 Query 181 CGGTCGTCATGGCCGGGCTTGCCATGGGCAAGACGATCTTCCACAGCGTCTCGGCCTTGG 240 ||||| |||| |||||||| ||||| |||| ||||||||||||||||| || ||||||| Sbjct 163 CGGTCATCATCGCCGGGCTGGCCATCGGCAGCACGATCTTCCACAGCGTTTCCGCCTTGG 104 Query 241 TCGCGCCCAAGGCCAGCGAGCCCTCGCGCACGGTACGCGGAATACGCGCCAAACCTTCTT 300 ||||||||| |||| || || || || ||||| || ||||| ||||||| ||||||| Sbjct 103 TCGCGCCCAGTGCCAAAGAACCTTCACGTACGGTGCGAGGAATCCGCGCCAGGCCTTCTT 44 Query 301 CGGTGGCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGT 343 | |||||||||||||||||||| || |||||||| |||||||| Sbjct 43 CAGTGGCCACGATCACCACCGGTACCGCCAGCAGCGCCAGGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241503478016