Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001766.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq2082 80.6 3e-13 seq1148 78.8 1e-12 seq4314 75.2 1e-11 seq1767 75.2 1e-11 seq5959 73.4 4e-11 seq1920 73.4 4e-11 >seq2082 Length=9330 Score = 80.6 bits (88), Expect = 3e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||| ||||||| | |||||| || | || ||||||||||||||||||||| Sbjct 8595 GATGGCATCGCCTCGGTGTGGCAGATACACCGCGGGGCGCGCATCGCAGGCAAGCCAGCT 8536 Query 80 CCCACACAA 88 ||||||||| Sbjct 8535 CCCACACAA 8527 >seq1148 Length=6036 Score = 78.8 bits (86), Expect = 1e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||| |||||| | |||||| |||||| || |||||||||||||||||||| Sbjct 1953 GATGGCATCGCCTCGGTCTCGCAGATACACCGAGTCACCTGCATCGCAGGCAAGCCAGCT 1894 Query 80 CCCACA 85 |||||| Sbjct 1893 CCCACA 1888 >seq4314 Length=204 Score = 75.2 bits (82), Expect = 1e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||| ||||||| |||||| | |||| | | |||||||||||||||||||| Sbjct 72 GATGGCATCGCCTCGGTGTATCTGAAAACCCGAGGTGTCTGCATCGCAGGCAAGCCAGCT 131 Query 80 CCCACACAA 88 |||||| || Sbjct 132 CCCACAGAA 140 >seq1767 Length=4366 Score = 75.2 bits (82), Expect = 1e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||| ||||| | ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct 3231 GATAGCATCACCGAGGTGCATCTGACACACCGAGGTGCCCGCATCGCAGGCAAGCCAGCG 3172 Query 80 CCCACA 85 |||||| Sbjct 3171 CCCACA 3166 >seq5959 Length=2387 Score = 73.4 bits (80), Expect = 4e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||||||| | | |||| | | ||||||| | |||||||||||||||||||| Sbjct 1294 GATGGCATCGACTCAATACCACTGACAGACCGAGTCGACTGCATCGCAGGCAAGCCAGCT 1353 Query 80 CCCAC 84 ||||| Sbjct 1354 CCCAC 1358 >seq1920 Length=14951 Score = 73.4 bits (80), Expect = 4e-11 Identities = 66/82 (80%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAG-C 78 ||||||||| |||||| || |||| | |||| ||| ||||||| |||||||| | | Sbjct 10535 GATGGCATCACCTCGGTCTGTCGGATAGACCGAGGTGCCTGCATCGCGGGCAAGCCCGGC 10594 Query 79 TCCCACACAAGCCAGTGCCCAC 100 ||||||||||||||| ||||| Sbjct 10595 TCCCACACAAGCCAGCTCCCAC 10616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537559513008