Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001989.1 Length=469 Score E Sequences producing significant alignments: (Bits) Value seq1408 630 2e-178 >seq1408 Length=5557 Score = 630 bits (698), Expect = 2e-178 Identities = 421/469 (90%), Gaps = 0/469 (0%) Strand=Plus/Plus Query 1 CGAGCCCAGCGGCGGCAACACCGGCATTGGCCTGGTGATGGCGGGCAACGTGCTGGGCTA 60 |||||||||||| |||||||||||||| |||||||||||||| || |||||||||||||| Sbjct 733 CGAGCCCAGCGGTGGCAACACCGGCATCGGCCTGGTGATGGCCGGTAACGTGCTGGGCTA 792 Query 61 CAAAGTGGTGCTGGTGATCCCCGACAACTACAGCCCCGAAAAGCAGAAGCTGCTGCGCCT 120 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 793 CAAAGTGGTGCTGGTGATCCCCGACAACTACAGCCCCGAGAAGCAGAAACTGCTGCGCCT 852 Query 121 CTACGGCGCCAAGGTGGTGCTGTCAGACAGCCGCCTCGGTAACAATTCCTACGGCGAAAA 180 |||||||||| |||||||||||| ||||||||||| || ||||||||| |||||||||| Sbjct 853 GTACGGCGCCAGGGTGGTGCTGTCTGACAGCCGCCTGGGCAACAATTCCCACGGCGAAAA 912 Query 181 GTGCCTGGAACTGCAACTGGAAAACCCCAGCTACGTGATGCTCAACCAGCAACGCAATGG 240 |||| |||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| || Sbjct 913 GTGCATGGAGCTGCAGCTGGAAAACCCCAGCTACGTGATGCTCAATCAGCAGCGCAACGG 972 Query 241 CGCCAACCCGCAAACCCACCGCGACACCACCGCACCCGAGATCCTGCGCGCTTTTGGTGA 300 |||||||||||| |||||||| ||||||||||| | || ||| | ||||| || || || Sbjct 973 CGCCAACCCGCAGACCCACCGTGACACCACCGCCCGGGAAATCATCCGCGCCTTCGGCGA 1032 Query 301 GCGGCGCGTGGACTACTTCGTCAGCGGCATCGGCACCGGTGGCCACATCACCGGCATCGG 360 || ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 1033 GCTGCGTGTGGACTACTTCGTCAGCGGCATCGGCACCGGGGGCCATATCACCGGCATCGG 1092 Query 361 CGAAACCCTCAAGGCCGCCTGGCCGGAGCTGCGCGTCATGGGCGTGGAGCCGGAAGAGTG 420 ||||||||||||| | ||||||||| | | ||||| ||||| ||||||||||||||||| Sbjct 1093 CGAAACCCTCAAGAGCACCTGGCCGGCGATCCGCGTGATGGGGGTGGAGCCGGAAGAGTG 1152 Query 421 CGACCTGCTGAAAAACCAGCACGCGCCGCACCATATCCAGGGCCTGTCG 469 ||||||||| | ||| || ||||||||||||||||||||||||||| Sbjct 1153 CGACCTGCTCAGCGACCGCCATGCGCCGCACCATATCCAGGGCCTGTCG 1201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1398291288384