Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001997.1 Length=304 Score E Sequences producing significant alignments: (Bits) Value seq1961 347 2e-93 >seq1961 Length=5369 Score = 347 bits (384), Expect = 2e-93 Identities = 264/305 (87%), Gaps = 5/305 (2%) Strand=Plus/Plus Query 1 CCGCATCGTCAAACGCAGGGAACTTCGCCAGCTTCCATTCGGTTCCCCGAGTTTCttttt 60 ||||||||||||| ||||||||||| ||||| ||||||| |||| ||||||||| |||| Sbjct 1883 CCGCATCGTCAAATGCAGGGAACTT-GCCAG-TTCCATT-GGTTACCCGAGTTTAATTTT 1939 Query 61 ttttCGCAAGCGGGCCAATCGTTGGCCACGCGACAGGG-CATTCAAGCAGTTGAAATTAG 119 ||| |||||||||||||||||||||||||| | |||| ||||||||||| || |||||| Sbjct 1940 TTT-CGCAAGCGGGCCAATCGTTGGCCACGACAGAGGGGCATTCAAGCAGATGGAATTAG 1998 Query 120 AAAATGCGCTCTAAACAGCAAGACCGTTGAGCTAGAGCATCAGCCGCACGACCGACTCAC 179 ||||||| | |||| ||||||| || ||||||||||||||||||||||||||| | Sbjct 1999 AAAATGCCCACTAATGAGCAAGAGGCCTGGGCTAGAGCATCAGCCGCACGACCGACTGGC 2058 Query 180 TCGGATCGCGGGTTTTACCAGCGGCTTTGAGCTCGGCCAGGTAGTCGGCCCACAAAGCGT 239 |||| ||||||||||| || |||||||| |||||||| || ||||| ||||||| |||| Sbjct 2059 TCGGGTCGCGGGTTTTTCCGGCGGCTTTCAGCTCGGCAAGATAGTCAGCCCACAGCGCGT 2118 Query 240 CCTGACGTACGGCCAACTGATAGAGGTAGTCCCAGGTGAACAGTCCGCTGTCATGACCGT 299 ||||||| ||||| | ||||||||||||||||||||||||| |||||||||||| || | Sbjct 2119 CCTGACGCACGGCAAGTTGATAGAGGTAGTCCCAGGTGAACAATCCGCTGTCATGGCCAT 2178 Query 300 CGTCG 304 ||||| Sbjct 2179 CGTCG 2183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 870332335104