Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001999.1 Length=541 Score E Sequences producing significant alignments: (Bits) Value seq4229 297 6e-78 >seq4229 Length=5128 Score = 297 bits (328), Expect = 6e-78 Identities = 220/257 (86%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 283 GCCAGTTCCTGCCACAGGGCGATGGTCTCGTCATCCGCCTGCTTGGGCATTACTGCCTTG 342 |||||||||||||||| || || |||||| || | | || ||||| || |||||| Sbjct 1302 GCCAGTTCCTGCCACAACGCCTTGACCTCGTCGTCGGTGTTTTTCGGCATCACCGCCTTG 1243 Query 343 AGCTGGATGTACAGGAAACCTCGCTCCCCAGCCTTGTTCAGCAAGCCATGGCCCTTGGCG 402 || || | ||||| |||| |||| ||| |||||||||| ||||||||||||||||||| Sbjct 1242 AGTTGCACAAACAGGTAACCGCGCTGCCCGGCCTTGTTCAACAAGCCATGGCCCTTGGCG 1183 Query 403 CGCATGCGCTGGCCGTTCTGGCTGCCGGCCGGCACCTTGAGGTTGATCTTGCCGGTCAGG 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1182 CGCATGCGCTGGCCGTTCTGGCTGCCGGCCGGCACCTTGAGGTTGATCTTGCCGGTGAGG 1123 Query 463 GTCGGCACGGCCACTTCGGCGCCCAGCGCCAGTTCCCACGGTGCCAGTGGCAAGGTGATC 522 |||||||| |||||||| | ||||| |||||| |||||||| |||||||||| |||||| Sbjct 1122 GTCGGCACCGCCACTTCCGTGCCCAACGCCAGCTCCCACGGGGCCAGTGGCAGGGTGATG 1063 Query 523 ACCAGGTTGTCGCCTTC 539 | |||||| || ||||| Sbjct 1062 ATCAGGTTCTCACCTTC 1046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1628673377088