Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01002003.1 Length=209 Score E Sequences producing significant alignments: (Bits) Value seq3165 125 8e-27 >seq3165 Length=1285 Score = 125 bits (138), Expect = 8e-27 Identities = 147/192 (77%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 3 AACAGCACGCGCACGTAGCGGCCCGAGGTCTTCGGGGCCGGTCCACAGGCCACCGGCGGC 62 || |||| |||||||||| ||| |||||| | ||||| | |||||| ||||||||| || Sbjct 1081 AAGAGCATGCGCACGTAGTGGCT-GAGGTCCTTGGGGCTGCTCCACAAGCCACCGGCCGC 1023 Query 63 GAGGTCACGCACCCGGGGGTCGGTGCCGGCCTTCGCCATCCTCGTAGCCGTGGGCGCGAT 122 ||||| |||||| ||| ||||| || | | | ||| || | || || |||||||| Sbjct 1022 AAGGTCGCGCACCTGGGCGTCGGCGCTGACGGT-GCCGTCTGCATAACCCCGGGCGCGAA 964 Query 123 AGCTCATTTCGCGCACCGGTACCCAGGAAACTCGGACTGGTTCATTTCGCAAGGGTGTGA 182 ||| | || ||| ||||| || | ||| |||| |||||||||| || || ||| ||| Sbjct 963 AGCCCGGTT-GCGAGCCGGTGCCGACGAAGCTCG-ACTGGTTCATCTC-CAGGGGCTTGA 907 Query 183 GCAGGCTGCTTT 194 |||||||||||| Sbjct 906 GCAGGCTGCTTT 895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569557103068