Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01002035.1 Length=329 Score E Sequences producing significant alignments: (Bits) Value seq1066 547 1e-153 >seq1066 Length=33981 Score = 547 bits (606), Expect = 1e-153 Identities = 320/326 (98%), Gaps = 4/326 (1%) Strand=Plus/Plus Query 4 TTCGGCAATAGCGAAAAGGAAAACCACCATCGCGGCTTCCGGCCACTTCGCCAATCACCA 63 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 25345 TTCGGCAATAGCGAAAAGGAAAACCACCATCGCGGCTTCCGGCCACTT-GCCAATCACCA 25403 Query 64 TGGGCACCCAAGACAGCCAAAGACATCAAGGAGTAGATGTTCAATGTGAAGTTCTTTACA 123 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 25404 TGG-CACCCAAGACAGCCAAAGACATCAAGAAGTAGATGTTCAATGTGAAGTTCTTTACA 25462 Query 124 GCGATCCACCCCTTCTTCAGTAGTTGGTAGACCAGCAGTAAGAATGGACAGCGCAGCCAA 183 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 25463 GCGATCCACCCCTTCTTCAG-AGTTGGTAGACCAGCAGTAAGAATGGACAGCGCAGCCAA 25521 Query 184 GGACATTTACAGGCAAAGAACCCTCCTGTCCGGTCGTCCAAGCGATCACTTCAGCGGCGA 243 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25522 GGACATT-ACAGGCAAAGAACCCTCCTGTCCGGTCGTCCAAGCGATCACTTCAGCGGCGA 25580 Query 244 TGGCAGCTAGACCGCTGACCGCCAGCAGCCCTTTCAAGCGCGTCGTCAGAGCAGGTGAAA 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25581 TGGCAGCTAGACCGCTGACCGCCAGCAGCCCTTTCAAGCGCGTCGTCAGAGCAGGTGAAA 25640 Query 304 TGGCATTCGGGGTTGCGCCGGCCCCG 329 ||||||||||||||||||||||| || Sbjct 25641 TGGCATTCGGGGTTGCGCCGGCCTCG 25666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 950326115904