Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq760 684 0.0 >seq760 Length=2252 Score = 684 bits (758), Expect = 0.0 Identities = 496/570 (87%), Gaps = 4/570 (1%) Strand=Plus/Minus Query 4 TCGACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTC 63 |||||| ||| |||| ||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct 2076 TCGACCATCGTGTTCTGGTCGTTCCGGGTCATGGTGGGCCTGGGCTTCCTGATGATCTTC 2017 Query 64 ACCGGTCTAGTTCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGT 123 ||||| || |||||||| ||||| |||||| |||||||||||||||||||||||||||| Sbjct 2016 ACCGGCCT-GTTCAGCCTCTGGCT-GCGCCGTGGCGACAAGATGTACACGTCCAAGCCGT 1959 Query 124 TCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGT 183 |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1958 TCCTGTACCTGGCGCTGTGGATGGGCCCGTCCGGCCTGATCGCGATTCTCGCCGGCTGGT 1899 Query 184 TCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATG 243 ||||||| || |||||||| |||||||||||||||||||| |||||||||||||| || | Sbjct 1898 TCACCACCGAGATCGGCCGACAGCCGTGGGTGGTCTACGGGCTGATGCGCACGGCAGACG 1839 Query 244 CGTCCTCCGGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGT 303 | || ||| || || | | |||||||| |||||| |||||||||| |||||||||| Sbjct 1838 CCTCGTCCAACCACAGTTTTGCGCAGATGAGCATTACGTTGGTGTTGTTTGTGGTGGTGT 1779 Query 304 ACTTCGCGCTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGC 363 |||||||||||||||| || || |||||||||||||||||||||||||||||||| || Sbjct 1778 ACTTCGCGCTGTTCGGCGCGGGCCTGGGCTACATGATGCGCCTGGTGCGCAAAGGGCCTG 1719 Query 364 AGACCCACGAAGGCGATGAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCAGCCC 423 |||||||||| || ||||| ||||||||||| ||||| ||||||||||| || || | Sbjct 1718 TGACCCACGAAAGCACCGAGCCCACCCACGGTGGCCCTGGGCAGAAACGCACACCGGCGC 1659 Query 424 GTCCGTTGTCTGCCGCCGATGATGGCAGCGATGACGACCACACCCACATCCAGCACAAGG 483 |||||||||| || || ||||| | ||||| ||| ||| | ||| | | |||||| Sbjct 1658 GTCCGTTGTCGGCGGCTGATGACAGTGCCGATGCCGATCACGGCGACACCTTGAACAAGG 1599 Query 484 GGCATTGAG--ATGGGTATTGATCTTCCGCTGATCCGGGCCGTGATCATCATCTTCGGCA 541 || | |||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1598 GGAACTGAGCCATGGGTATTGATCTTCCGCTGATCTGGGCCGTGATCATCATCTTCGGCA 1539 Query 542 TCATGATGTACGTGGTCATGGACGGCTTCG 571 |||||||||||||||||||||||||||||| Sbjct 1538 TCATGATGTACGTGGTCATGGACGGCTTCG 1509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724665914048