Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017-
01-02] 7,774 sequences; 48,621,035 total letters
Query= AAMG01002062.1
Length=351
Score E
Sequences producing significant alignments: (Bits) Value
seq6571 269 5e-70
seq3283 95.1 2e-17
>seq6571
Length=832
Score = 269 bits (298), Expect = 5e-70
Identities = 245/309 (79%), Gaps = 20/309 (6%)
Strand=Plus/Minus
Query 1 ACCAGGTCACCATCGTCGGCGCCGAATGCCGACCACGGTGCCGGTGTACCAGCGGGGTGA 60
|||||||| || ||||| ||||||| ||| |||||||||||||| |||||||||||||
Sbjct 307 ACCAGGTCGCCGTCGTCAGCGCCGA-TGCTCACCACGGTGCCGGTC-ACCAGCGGGGTGA 250
Query 61 TTTCCACCACGTCGCCGTTCACATAGGCGTCATCGGTGCTTTCATTGAAGCGCCCGTAGA 120
|||||||||||| |||||| || |||||||| ||||||||||| ||||||| || || |
Sbjct 249 TTTCCACCACGTTGCCGTTGACGTAGGCGTCGTCGGTGCTTTCGCTGAAGCGACCATACA 190
Query 121 ACTCATACCAGGCCCACACGCCCACCACACTGAGGATGACGATCAGCGCCAGGCCGATCA 180
| || ||||| |||||||||||| | | ||||||||||||||||||||| | | ||
Sbjct 189 ATTCGTACCAACCCCACACGCCCAAGGCGCCGAGGATGACGATCAGCGCCAGCACAAACA 130
Query 181 GCATCACTTTGCGTTTGCGCGGGTTGGTGTCTTTGGGTTGTTCGGTC------------- 227
|||| ||||||||||||||||| ||| || ||||||||||| | |
Sbjct 129 GCATGACTTTGCGTTTGCGCGGATTGCTGGTGTTGGGTTGTTCAGCCTTGTTTGTTTCAG 70
Query 228 --GCGTTGGTGC---TTTCGGCAGTGGCCATGACAAATACCTCAAATTATTCCGTGCGTG 282
|||||| ||| ||||||||||||||||||||| ||||| |||||||| ||||| |
Sbjct 69 GAGCGTTGTTGCTGGTTTCGGCAGTGGCCATGACAAGTACCTTGAATTATTCAGTGCGCG 10
Query 283 TTGCGGGGG 291
| || ||||
Sbjct 9 TGGCTGGGG 1
>seq3283
Length=312
Score = 95.1 bits (104), Expect = 2e-17
Identities = 72/85 (85%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 267 AATTATTCCGTGCGTGTTGCGGGGGTGGTCGCGGCCACGCTGTTGGCGTGATACCCGCCA 326
|||||||| ||||| || || |||||||||| ||||||| | | |||||| | |||||
Sbjct 3 AATTATTCAGTGCGCGTGGCTGGGGTGGTCGAGGCCACGTTATCGGCGTGGAAACCGCCG 62
Query 327 CCCAGGGCCTGCATCAATTGAATCG 351
|||||||||||||||| ||||||||
Sbjct 63 CCCAGGGCCTGCATCAGTTGAATCG 87
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1020720643008
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |