Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01002083.1 Length=362 Score E Sequences producing significant alignments: (Bits) Value seq1556 114 3e-23 >seq1556 Length=3876 Score = 114 bits (126), Expect = 3e-23 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 1 CGAGGCCAGCGACGAGGCACGTACTCACCATTGGCGCTGTGGCAATGACATTGCCCACAG 60 ||| |||||||| || || || || ||| |||||||||||||| || || |||||||| Sbjct 3434 CGACGCCAGCGATGAAGCCCGCACCACCCACTGGCGCTGTGGCAACGATATCGCCCACAG 3493 Query 61 CTTGCAGGTAGCTGGGTTCAAGGGCCGCTTCCAGATGCTCAGCGACCCACTGTGCATGGG 120 | || || || ||| ||||||||||||||| |||||| | |||||| |||||||||| Sbjct 3494 CCTGGGCGTGGCGGGGGTCAAGGGCCGCTTCCGGATGCTGATTGACCCATTGTGCATGGG 3553 Query 121 CCCCGT 126 ||| || Sbjct 3554 CCCGGT 3559 Score = 96.9 bits (106), Expect = 7e-18 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 247 ACTGGCCGGCGCCGAACATAGCGTGTTGTGGTGTGAAGCGGATGCCTATGACCAATTGTT 306 ||||| | |||||| || ||||||||||||||||| |||||||| || || || ||||| Sbjct 3687 ACTGGGCAGCGCCGGCCACAGCGTGTTGTGGTGTGAGGCGGATGCGTACGATCAGTTGTT 3746 Query 307 CCTGATTCGCGCACTCTCAAGTCTTGAACGCACGCCGAAAAAACTTGAGCTGATCG 362 |||||||||||| || | | ||||| | ||| ||||||| ||| |||||| Sbjct 3747 CCTGATTCGCGCGCTGGCTGGGCTTGAGCATCTGCCTGAAAAACTGGAGTTGATCG 3802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1055917906560