Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq2001 394 2e-107 >seq2001 Length=5514 Score = 394 bits (436), Expect = 2e-107 Identities = 268/299 (90%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 812 TTCGCCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATCGCGTC 871 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGC 168 ||||||||||||||| ||||||||||||||||| || || |||||||| ||||| ||||| Sbjct 872 GCGCTCGTTCCACAGCGCCAGGCCCAGGCACCAGCGCTGGGCCTTGTCGCTGAAGCCCGC 931 Query 169 CAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGC 228 |||||| ||||||||||| ||||||||||||||||| || || || |||||||||||| Sbjct 932 CAGGCCATCCTCGCCCCAGCGGTAGGCGCGGCTGCGGGCGTGCTCGTGGGGGAAGTAGCG 991 Query 229 CCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAG 288 |||||| ||||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 992 CCAGGCATCGCCGTCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGCCGCTCGCTCAG 1051 Query 289 GTAGGGGCCCCACTCGCGCCAGCGCTCGGCGTC--GCTGGTTGCCAGGCGTTGGCCTTC 345 |||||||||||| || |||||||||||| |||| ||| | |||||||| |||||||| Sbjct 1052 GTAGGGGCCCCAGTCACGCCAGCGCTCGCCGTCAGGCT--TGGCCAGGCGCTGGCCTTC 1108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007921638080