Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01002172.1 Length=233 Score E Sequences producing significant alignments: (Bits) Value seq3068 333 3e-89 >seq3068 Length=5635 Score = 333 bits (368), Expect = 3e-89 Identities = 215/233 (92%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 1 TCGAGTGGTCAAGCCGACCTTCGTGCGCCATGGCAAAACCTTGATCTAATCTATTTCCGG 60 ||| |||||||| ||||| |||||||||||||||||||| ||||||||| || ||||||| Sbjct 2638 TCGGGTGGTCAAACCGACGTTCGTGCGCCATGGCAAAACATTGATCTAA-CT-TTTCCGG 2695 Query 61 CAGGCCAATGGCCGCTGACATTACTTCTTGAGGACACAGACTATGAGCGATATCCCTGCC 120 | |||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 2696 CGGGCCAATGGCCGCTGACATTTTTCCTTGAGGACACAGACTATGAGCGATATCCCTGCC 2755 Query 121 GACCTGCGTTTTGCCGAAAGTCACGAATGGGCCCGTCTGGAAGCTGACGGCACCGTGACC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2756 GACCTGCGTTTTGCCGAAAGTCACGAATGGGCCCGTCTGGAAGCTGACGGCACCGTGACC 2815 Query 181 GTGGGTATCTCCGACCATGCCCAGGAAGCGTTGGGGGATGTGGTGATTGTCGA 233 || || ||||| ||||||||||||||||| ||||||||||| ||| | || || Sbjct 2816 GTCGGGATCTCGGACCATGCCCAGGAAGCATTGGGGGATGTAGTGTTCGTTGA 2868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 646351319212