Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01002205.1 Length=300 Score E Sequences producing significant alignments: (Bits) Value seq3049 437 1e-120 >seq3049 Length=13839 Score = 437 bits (484), Expect = 1e-120 Identities = 264/277 (95%), Gaps = 1/277 (0%) Strand=Plus/Plus Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGC 83 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 9837 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGATGGTCCATGTGCATGTCGGC 9896 Query 84 AAGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTT 143 ||||||||| |||||| ||||||||||| |||||||||||||||||||| || ||||||| Sbjct 9897 AAGAATATT-GGCCACGGCAAGAGGATGCGTGACATACGCCTCGCCACTGCGGCGGCGTT 9955 Query 144 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTG 203 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 9956 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACCTGGTCTG 10015 Query 204 CGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTC 263 ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 10016 GGCCGAGGTAGGTCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTATTAACTC 10075 Query 264 CTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 300 |||||| |||||||||||||||||||||||||||||| Sbjct 10076 CTGCCGTTGGCTGTGACCCCGCGCCGTGCTACGTCGA 10112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 857533330176