Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq2 352 1e-94 seq1755 349 1e-93 seq1407 264 4e-68 seq1569 214 6e-53 seq6 118 4e-24 >seq2 Length=124989 Score = 352 bits (390), Expect = 1e-94 Identities = 420/566 (74%), Gaps = 28/566 (5%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||| ||||||||| ||||| ||| || ||||| | | || || Sbjct 3390 TCGACTTGTTAGTCTCACAGTCAAGCACCCTTATGCTATTGCACTCTATGCACGGTTACC 3449 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | |||||||| ||||||| ||||||||||| |||| ||||| | |||||||||| Sbjct 3450 ATTCGTGCTGAGGGTACCTTTGAAAGCCTCCGTTACTTTTTAGGAGG-CGACCGCCCCAG 3508 Query 121 TTAAACTACCCACCAGGCACTGTCC-CCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 | ||||||||||||| ||||||| || | | ||| || |||| | | || | Sbjct 3509 TCAAACTACCCACCAAACACTGTCTTCCTGCTC---TCA-GGAATGAGGTAACACATATA 3564 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | || |||||||||||| | |||||||| | |||||| | || ||| || Sbjct 3565 TCAAGG-----GTGGTATTTCAAGATTGACTCCACCATGCCTAGCGACACAGCTTCAAAG 3619 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 |||||||||||||||||||| || | ||||||| |||||||||| ||||| | Sbjct 3620 TCTCCCACCTATCCTACACATGATATACATATTGCCAATGTTAAGCTATAGTAAAGGTTC 3679 Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||||||||| || ||| | || ||||||| || |||| |||||||||| Sbjct 3680 ATGGGGTCTTTTCGTCCCGCTGCGGGTAAGCGGCATCTTCACCGCTACTACAATTTCACC 3739 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | || || ||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 3740 GAGCTCTTGATTGAGACAGTGCCCAAGTCGTTAAACCATTCGTGCAGGTCGGAACTTACC 3799 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||| Sbjct 3800 CGACAAGGAATTTCGCTACCTTAGGACCGTCATAGTTACGGCCGCCGTTTACTGGGGCTT 3859 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTG----CTCACGAGTCCTCTTAACCTTCCAG 534 ||||| || | | || | || || ||||||||||||||||| Sbjct 3860 CAATT------------CAATGCTTTGTCCGAAAACTAACATCTCCTCTTAACCTTCCAG 3907 Query 535 CACCGGGCAGGCGTCAGTCCGTATAC 560 ||||||||||| |||| || ||||| Sbjct 3908 CACCGGGCAGGTATCAGGCCTTATAC 3933 >seq1755 Length=4651 Score = 349 bits (386), Expect = 1e-93 Identities = 342/443 (77%), Gaps = 20/443 (5%) Strand=Plus/Plus Query 123 AAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTA 182 ||||||||||||| ||||||||| | || ||| | || || ||||||| ||||| Sbjct 1222 AAACTACCCACCATACACTGTCCCGGATCCGGATAACGGACCGCGGTTAGACATCCATAT 1281 Query 183 CGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCT 242 ||| || |||||||||||| | |||||||| | || ||| |||| ||| ||||| Sbjct 1282 AGGTAAGGGTGGTATTTCAAGGATGACTCCACGAAGGCTGGCGCCCCCGCTTCAAAGTCT 1341 Query 243 CCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CG 301 |||||||||||||||| ||| ||||||||| | |||||||||| ||||| | || Sbjct 1342 ACCACCTATCCTACACATGCCGACACGAATGCCAGTGTAAAGCTATAGTAAAGGTGCACG 1401 Query 302 GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGG 361 |||||||| |||| |||| ||| | ||||||| || | | | ||||||||| | | Sbjct 1402 GGGTCTTTCCGTCTAACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTGAG 1461 Query 362 CCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGA 421 ||| | | |||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct 1462 TCTGCGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGA 1521 Query 422 CAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAA 481 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| | Sbjct 1522 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGA 1581 Query 482 TTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGG 541 || || | | | ||| |||||||||||||||||||||||| Sbjct 1582 TT----------CAAAGCTTG---------CACCTCTCCTCTTAACCTTCCAGCACCGGG 1622 Query 542 CAGGCGTCAGTCCGTATACCTCG 564 |||||||||| || ||||| ||| Sbjct 1623 CAGGCGTCAGACCCTATACGTCG 1645 >seq1407 Length=3311 Score = 264 bits (292), Expect = 4e-68 Identities = 328/445 (74%), Gaps = 17/445 (4%) Strand=Plus/Minus Query 123 AAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTA 182 ||||||||||||| |||||||| | | || ||| | || || |||||| || | | Sbjct 2404 AAACTACCCACCATACACTGTCCTCGATCCGGATAACGGACCTGAGTTAGAA--CCTCAA 2347 Query 183 CGGT--CAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 | | ||| |||||||||||| | |||||| ||| |||| ||| ||| || Sbjct 2346 AGTTGCCAGGGTGGTATTTCAAGGTTGGCTCCACGCGAACTGGCGTCCACGCTTCAAAGC 2287 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 |||||||||||||||||||| | | || ||| | | |||||||||| ||||| | Sbjct 2286 CTCCCACCTATCCTACACAAGCAAATTCAAAGTCCAGTGCAAAGCTATAGTAAAGGTTCA 2227 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGA-GCATCTTTACTCGTACTGCAATTTCACC 358 |||||||||| |||| |||||| || || ||||||| || | | ||||||||| Sbjct 2226 CGGGGTCTTTCCGTCTAGCCGCG-GATACACTGCATCTTCACAGCGATTTCAATTTCACT 2168 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | | || ||| |||||||| | ||||||||||||||||||||||||||||||||| Sbjct 2167 GAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 2108 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct 2107 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTT 2048 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACC 538 | || | || || | || ||| || | |||||||||| ||||| Sbjct 2047 CGATCAAGAGCTTCGC----------GTTAGCTAACCCCATCAATTAACCTTCCGGCACC 1998 Query 539 GGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||| || ||||| || Sbjct 1997 GGGCAGGCGTCACACCCTATACGTC 1973 >seq1569 Length=2469 Score = 214 bits (236), Expect = 6e-53 Identities = 300/417 (72%), Gaps = 13/417 (3%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||| ||||| | ||| ||||||||| ||| ||| || ||||| || | || || Sbjct 778 TCGGCTTGTCTGCCTCACAGTCAAGCAAGCTTATGCTATTGCACTCCTCATACGGTTACC 837 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||| ||||||| ||||||||||| |||| ||||| | ||| |||||| Sbjct 838 AAGCGTATTGAGCTTACCTTTGAAAGCCTCCGTTACCTTTTTGGAGG-CGACCACCCCAG 896 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||| || || ||||| | | || | |||||| | | | Sbjct 897 TCAAACTACCCATCAAACAATGTCCTCCGACTAGCGGA---------GTTAGACACCGAA 947 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| | || ||||||||||||| |||||||| || |||||| ||||| ||||||| Sbjct 948 TACAGAAAGGGTGGTATTTCAACGTTGACTCCACGACGCCTAGCGACGCCGCTTCATAGT 1007 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGT-CC 299 ||||||||||||||||||| | | | | |||| |||| || | |||||||||| | Sbjct 1008 CTCCCACCTATCCTACACATCCTGTATCCAATGTCAATGTTAAATTGTAGTGAAGGTGCA 1067 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||| ||||| | ||| | | | || |||| || | || ||||||||||| Sbjct 1068 TGGGGTCTTTCCGTCCCGTTGCGGGTACCCGGCGTCTTCACCGGGACCACAATTTCACCG 1127 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTT 415 || ||| ||||||||| | || ||||||| |||||||||||||||||||||| Sbjct 1128 AGCTCATGGCTGAGACAGC-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTT 1183 >seq6 Length=53452 Score = 118 bits (130), Expect = 4e-24 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 ||||||| |||| |||||||| |||||| |||| ||| || |||| ||||||||||| Sbjct 8339 GAGACAGTAGGGAGGTCGTTACACCATTCATGCACGTCAAAAATTACTTGACAAGGAATT 8280 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 |||||||||| ||| || || ||||| ||||||||||||||| |||||||| Sbjct 8279 TCGCTACCTTTGGACCGTCATGGTTACAGCCGCCGTTTACTGGGACTTCAATT 8227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702267655424