Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq704 466 3e-129 seq798 170 4e-40 seq782 170 4e-40 seq773 170 4e-40 >seq704 Length=7291 Score = 466 bits (516), Expect = 3e-129 Identities = 290/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 381 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTCGCTGGTCGCCGGCTTCTTAG 322 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 321 AGGGACTGTCAGCGTCTAGCTGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 262 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 261 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 202 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 201 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 142 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 141 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 82 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 81 GCCCTTTGTA 72 >seq798 Length=3170 Score = 170 bits (188), Expect = 4e-40 Identities = 197/260 (76%), Gaps = 9/260 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| | || |||||| | |||||| |||||||||||||||||||| Sbjct 907 CTTCTTAGAGGGACTACCTGCCTCAAGCAGGCGGAAGTCCGAGGCAATAACAGGTCTGTG 848 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACAGAGCCAACGAGTTCATC 189 |||||||||||| |||||||||||||||||||| || | | ||| || ||| Sbjct 847 ATGCCCTTAGATACCTTGGGCCGCACGCGCGCTACAATGCAGATAGCAAAAAGGTT---- 792 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA-ACTCTGTCGTGCTGGGGATAGAGCAT 248 ||| | | |||| | ||||||||| | || |||| ||| ||||| || | | Sbjct 791 -CCTGGTCTGGAAAGATTGGGTAATCAATTGAATTTTCTG-CGTAACTGGGATTGATCTT 734 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||||||| || |||||||||||| ||| ||||||| ||||| | | | ||| Sbjct 733 TGTAATTATTGATCATCAACGAGGAATTCCTTGTAAGCGTAAGTCATTACCTTATGCTGA 674 Query 309 TTACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 673 ATATGTCCCTGCCCTTTGTA 654 >seq782 Length=3813 Score = 170 bits (188), Expect = 4e-40 Identities = 197/260 (76%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| | || |||||| | |||||| |||||||||||||||||||| Sbjct 79 CTTCTTAGAGGGACTACCTGCCTCAAGCAGGCGGAAGTCCGAGGCAATAACAGGTCTGTG 138 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACAGAGCCAACGAGTTCATC 189 |||||||||||| |||||||||||||||||||| || | | ||| || ||| Sbjct 139 ATGCCCTTAGATACCTTGGGCCGCACGCGCGCTACAATGCAGATAGCAAAAAGGTT---- 194 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA-ACTCTGTCGTGCTGGGGATAGAGCAT 248 ||| | | |||| | ||||||||| | || |||| ||| ||||| || | | Sbjct 195 -CCTGGTCTGGAAAGATTGGGTAATCAATTGAATTTTCTG-CGTAACTGGGATTGATCTT 252 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||||||| || |||||||||||| ||| ||||||| ||||| | | | ||| Sbjct 253 TGTAATTATTGATCATCAACGAGGAATTCCTTGTAAGCGTAAGTCATTACCTTATGCTGA 312 Query 309 TTACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 313 ATATGTCCCTGCCCTTTGTA 332 >seq773 Length=3987 Score = 170 bits (188), Expect = 4e-40 Identities = 197/260 (76%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| | || |||||| | |||||| |||||||||||||||||||| Sbjct 2212 CTTCTTAGAGGGACTACCTGCCTCAAGCAGGCGGAAGTCCGAGGCAATAACAGGTCTGTG 2271 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACAGAGCCAACGAGTTCATC 189 |||||||||||| |||||||||||||||||||| || | | ||| || ||| Sbjct 2272 ATGCCCTTAGATACCTTGGGCCGCACGCGCGCTACAATGCAGATAGCAAAAAGGTT---- 2327 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA-ACTCTGTCGTGCTGGGGATAGAGCAT 248 ||| | | |||| | ||||||||| | || |||| ||| ||||| || | | Sbjct 2328 -CCTGGTCTGGAAAGATTGGGTAATCAATTGAATTTTCTG-CGTAACTGGGATTGATCTT 2385 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||||||| || |||||||||||| ||| ||||||| ||||| | | | ||| Sbjct 2386 TGTAATTATTGATCATCAACGAGGAATTCCTTGTAAGCGTAAGTCATTACCTTATGCTGA 2445 Query 309 TTACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 2446 ATATGTCCCTGCCCTTTGTA 2465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947192431872