Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq230 100 2e-16 >seq230 Length=51241 Score = 100 bits (110), Expect = 2e-16 Identities = 374/580 (64%), Gaps = 20/580 (3%) Strand=Plus/Plus Query 65999 TTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCG 66058 |||| |||| ||| |||||||| || || ||||| ||||| || || | || || | Sbjct 28909 TTGGTAAGG-CAATGGATGCGAGATTACATACAGCAATCTCATCTGGGGATGTGTATTGA 28967 Query 66059 ACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTG 66118 | ||||||||| || |||||||||| || || || || | ||||| |||||| || Sbjct 28968 ATAATTTCGGTACAAAGATTACTGCTGCTAATAGTACCAAGATTCTTTTGATTGGATTTA 29027 Query 66119 CGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATG 66178 ||| || | ||| || || | || | || || || || |||||||| ||||| ||| Sbjct 29028 GAATTACAAGAATCTTTATAGAGAATAAATGGTGTACCAGTTTCAACTTGAGACTCCATG 29087 Query 66179 ATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAA 66238 || || |||||| | | || || | |||| || ||| || ||| Sbjct 29088 ATTGCAAACCAAAGTTCTTGAGCTTTAATTACACGTCTAGCAAGGCCTG---GT--GTAT 29142 Query 66239 TGTTCGTA---GAGGT---GTTCGAAGGATTCACCCCATACT-----TCGGACAGACATG 66287 | ||| || ||| | |||| | ||| | | | | ||| |||| || Sbjct 29143 T-TTCATATTTGAGATAAAGTTC--ACGATGTTCTTCTGAGTGAGTTTCGTCAAGACGTG 29199 Query 66288 GACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATA 66347 | | || ||||| | || |||||||| || | |||||||| | ||| || | Sbjct 29200 GGGCTTCGTTAGGACAAAAGAGTGACCAATCTCCGTTTTGTTCTACTCTTTCCATGAAAA 29259 Query 66348 GATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGAT 66407 |||| | ||| || ||||| |||||||| | |||| || || | || |||| Sbjct 29260 GATCGCTGACCCAAAGAGCGTAAAAGAGATCTCTGGCTCTCATTTCTTCCTTACCATGAT 29319 Query 66408 TTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGA 66467 | || | || | || ||||| || || | ||||||||||| || || | || | Sbjct 29320 TCTTTTTGAGTTCAATAAATTCAAAAATATCTGAGTGCCATGGTTCGAGATATACTGCAA 29379 Query 66468 ACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACAC 66527 | | || | | ||| || |||||||| || || || ||||| || ||||| |||| Sbjct 29380 AGGCACCTTTTCTTTTACCACCACCTTGATCTACATAACGAGCAGTATCATTGAAAACAC 29439 Query 66528 GCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 | | ||| ||||| | || ||| |||||||||| || Sbjct 29440 GGAGCATTGGTACCAAACCATTACTGGTGCCATTGGTACC 29479 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || ||||| || || |||| |||||| | || | ||||||||||| || || Sbjct 27981 TCAACAGTGAATTGAATAGCATCAGCAGCTGGACGAGTACGGAGATAGTACATACCAGTT 28040 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 ||||| || ||||| ||||||||||| |||| | ||| ||| || | || || Sbjct 28041 TTGAGACCTTTTTTCCAAGAGTAGAAATGCATTGATGTAAGTTTAGCAAAAGTTGGTTCA 28100 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 || | | | ||| || ||||| ||||| || || ||||||||| |||||||| Sbjct 28101 GCAATAAAAACATTGAAACTTTGACTTTGATCAATAAAAGCACCACGATCAGCAGCCATA 28160 Query 65258 TCAAT 65262 ||||| Sbjct 28161 TCAAT 28165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564128557360