Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-31 >seq1 Length=19924566 Score = 141 bits (156), Expect = 1e-31 Identities = 105/123 (85%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 19916440 CTAATTAATAGGTTTCAGTCTCGTTCGTTACCGGAATTAACCTGACAAATCACTCCACCA 19916381 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTC 261 |||||||||||||||||||||| ||||| ||||| |||||| || | |||||||| | Sbjct 19916380 ACTAAGAACGGCCATGCACCACTACCCAATAAATCATGAAAGAACTCTTAATCTGTCATT 19916321 Query 262 CCT 264 ||| Sbjct 19916320 CCT 19916318 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || |||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 19916647 CATTGTAGCGCGCGTGCGGCCCAAGATGTCTAAGGGCATCACAGACCTGTTATTGC 19916592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799992281