Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1 273 4e-71 >seq1 Length=19924566 Score = 273 bits (302), Expect = 4e-71 Identities = 185/205 (90%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 19920541 GTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAAAT 19920482 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATG-ATAGGAAGAGCCGACATCG 155 ||||||||||| || || |||||||||| | ||| ||||||||||||||||||| Sbjct 19920481 GGTGAACAATCATACCTTTTTTCAATTCTGCTT-GAAATGGATAGGAAGAGCCGACATCG 19920423 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 19920422 AAGGATCAAAAAGCAACGTCGCTATGAGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 19920363 Query 216 GTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||| |||| | ||||| Sbjct 19920362 GTAACTTTTCTGACACCCCAAGCCT 19920338 Score = 268 bits (296), Expect = 2e-69 Identities = 184/205 (90%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 18223604 GTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAAAT 18223663 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT-GATAGGAAGAGCCGACATCG 155 ||||||||||| || || |||||||||| | || |||||||||||||||||||| Sbjct 18223664 GGTGAACAATCATACCTTTTTTCAATTCTGCTT-GAAATGGATAGGAAGAGCCGACATCG 18223722 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 18223723 AAGGATCAAAAAGCAACGTCGCTATGATCGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 18223782 Query 216 GTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||| |||| | | ||| Sbjct 18223783 GTAACTTTTCTGACACCCCAAACCT 18223807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399991456