Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1 134 4e-29 >seq1 Length=19924566 Score = 134 bits (148), Expect = 4e-29 Identities = 137/178 (77%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||| | | ||||||||||| | ||| | |||||||||| ||||||||||||||||| Sbjct 19915538 TATGTGTCGTCACTACCTCTTCAATTCGAAAGTGGGTAATTTACGCGCCTGCTGCCTTCC 19915479 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || || ||||||||| | | | | |||||||||||| |||||||| |||||| ||||| Sbjct 19915478 TTAGAAGTGGTAGCCATCTGTAAAGCTCCCTCTCCGATGTCGAACCCCAATTCCTCGTTA 19915419 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220 ||||| | | |||||| || | || |||||| | | ||||||| |||||||| Sbjct 19915418 TCCGTTATAATCTTGGTAGTCCTCGATACTACCAACTGA--TTGATAGATCAGAAATT 19915363 Score = 93.3 bits (102), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 5/161 (3%) Strand=Plus/Minus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC-AAATAAAC 403 || |||||| || || ||| || | ||||| |||| | ||||| | ||| |||| Sbjct 19915236 CAAGTATTATCTTTATCATTCACAAAGCTATCCTTGTATTT---TACTAACCAAAGAAAC 19915180 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 || |||| | ||||||||| | |||||||||| || | ||||||||| |||| Sbjct 19915179 TATTACTGTTATAATGAGCCGTCCGCAGTTTCATCCTACTTGGTCTTTATACTTACACAT 19915120 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||| | | ||||||| | ||||||||| Sbjct 19915119 GCATGGCTTAATCTTTAACATCAGCATAT-AATACTGGCAG 19915080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399984896