Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq8107 77.0 1e-12 seq7942 77.0 1e-12 seq3229 77.0 1e-12 seq1173 77.0 1e-12 seq557 73.4 2e-11 >seq8107 Length=10988 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || Sbjct 10866 GGAAAAGAAACTAACCAGGATTCCCCTAGTAACGGCGAGTGAAACGGGAATAGCGCA 10922 >seq7942 Length=1669 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || Sbjct 70 GGAAAAGAAACTAACCAGGATTCCCCTAGTAACGGCGAGTGAAACGGGAATAGCGCA 14 >seq3229 Length=21241 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || Sbjct 12787 GGAAAAGAAACTAACCAGGATTCCCCTAGTAACGGCGAGTGAAACGGGAATAGCGCA 12843 >seq1173 Length=5803 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || Sbjct 5530 GGAAAAGAAACTAACCAGGATTCCCCTAGTAACGGCGAGTGAAACGGGAATAGCGCA 5586 >seq557 Length=13049 Score = 73.4 bits (80), Expect = 2e-11 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAG 53 ||||||||||||||||||||||||| |||||||||||||||| ||||| || Sbjct 7759 GGAAAAGAAACTAACCAGGATTCCCCTAGTAACGGCGAGTGAAACGGGAATAG 7707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230379849360