Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq8107 80.6 2e-13 seq3885 80.6 2e-13 seq3229 80.6 2e-13 seq1173 80.6 2e-13 seq4292 71.6 8e-11 >seq8107 Length=10988 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || |||||||| Sbjct 9933 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCAAGCT 9878 >seq3885 Length=13919 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || |||||||| Sbjct 2778 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCAAGCT 2833 >seq3229 Length=21241 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || |||||||| Sbjct 11853 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCAAGCT 11798 >seq1173 Length=5803 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| || |||||||| Sbjct 4598 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCAAGCT 4543 >seq4292 Length=2934 Score = 71.6 bits (78), Expect = 8e-11 Identities = 52/58 (90%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| || |||||||| ||||||||||||||||||| |||| || |||||||| Sbjct 2228 TCGGTAGTA-GCAACGGGCGGTGTGTACAAAGGGCAGGGACATAAT-CAGCGCAAGCT 2173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300773692220