Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq27498 145 1e-32 seq47670 102 1e-19 >seq27498 Length=503 Score = 145 bits (160), Expect = 1e-32 Identities = 174/228 (76%), Gaps = 19/228 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||| | ||||||| || || ||||| ||| |||||| |||| | Sbjct 335 GTACAAAGGGCAGGGACGCATTCAACGC-AGGTTAATGACCTGCGATTACTAAAAATT-C 278 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCAC-GATGAAATTTCAAAGATT 119 |||||| ||||||| |||||||| ||||| |||| ||| | | | | || | || Sbjct 277 CTCGTTTGAGACCAATAATTGCAAAGATCTGTCCCAGTCAAAGCAGGGACT--AAGGGTT 220 Query 120 ACCCGGACCTGTCGGCCAAGG-------TGAT--AG-ACTCGTTGAATACAT--CAGTGT 167 ||| ||||| |||||| || || | || ||||||| ||||| || ||| Sbjct 219 ACCACGACCTTTCGGCCGTGGGACGCCTTGTTCAAGCACTCGTTT--TACATGCCATTGT 162 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 215 | ||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 161 AACGCGCGTGCGGCCCAGAACATCTAAGGGCATGACTGACCTGTTATT 114 >seq47670 Length=304 Score = 102 bits (112), Expect = 1e-19 Identities = 146/199 (73%), Gaps = 19/199 (10%) Strand=Plus/Plus Query 30 AGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATC 89 || || ||||| ||| ||| | || ||||||||| ||||||| |||||||| |||| Sbjct 2 AGGTTAATGACCTGCGATTATAA--AAATTCCTCGTTTGAGACCAATAATTGCAAAGATC 59 Query 90 TATCCCCATCAC-GATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGG-------T 141 | |||| ||| | | | | || | ||||| ||||| |||||| || | Sbjct 60 TGTCCCAGTCAAAGCAGGGACT--AAGGGTTACCACGACCTTTCGGCCGTGGGACGCCTT 117 Query 142 GAT--AG-ACTCGTTGAATACAT--CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG 196 | | || ||||||| ||||| || |||| ||||||||||||||||||||||||||| Sbjct 118 GTTCAAGCACTCGTTT--TACATGCCATTGTAACGCGCGTGCGGCCCAGAACATCTAAGG 175 Query 197 GCATCACAGACCTGTTATT 215 |||| || ||||||||||| Sbjct 176 GCATGACTGACCTGTTATT 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751492330205