Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2575 280 3e-73 seq21608 255 1e-65 seq31908 158 2e-36 >seq2575 Length=10330 Score = 280 bits (310), Expect = 3e-73 Identities = 182/200 (91%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||| Sbjct 1971 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGTCAGT 2030 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| |||| || |||||| || || | |||||||||||||||||| Sbjct 2031 GGGTGAACAATCCAACCCTTAGCGTCTTCTGCGGCGCTAGGTTAGGAAGAGCCGACATCG 2090 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2091 AAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTG 2150 Query 216 GTAACTTTTCTGGCACCTCT 235 |||| | ||||| ||||||| Sbjct 2151 GTAATTATTCTGACACCTCT 2170 >seq21608 Length=1630 Score = 255 bits (282), Expect = 1e-65 Identities = 160/171 (94%), Gaps = 1/171 (1%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 || |||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct 1589 AGGAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-TAAGA 1531 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct 1530 GGGTGAACAATCCAACACTTACTGAATTCTGCTTTAGTATGATAGGAAGAGCCGACATCG 1471 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 1470 AAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTT 1420 >seq31908 Length=442 Score = 158 bits (174), Expect = 2e-36 Identities = 98/105 (93%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 || |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct 436 AGAGGGTGAACAATCCAACACTTACTGAATTCTGCTTTAGTATGATAGGAAGAGCCGACA 377 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 376 TCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCAC 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853804594272