Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq29991 78.8 3e-12 >seq29991 Length=467 Score = 78.8 bits (86), Expect = 3e-12 Identities = 134/193 (69%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 168 AGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGC 227 |||||||||| || |||| | |||| || || || | ||| | || ||||| Sbjct 334 AGTTGCCCGGATACGAAAGCAGTTTGCCGCGATCGAGTTCGACGATGCGCGTGGCCACGC 275 Query 228 TGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTGGGTCAGGA 287 || || || |||||||| | ||||| || | |||| |||||||| | || || Sbjct 274 GGTCGAGAAACGCGCGGTCGTGGGTGATGAAGAGGA---GGCTCGAACGCTGCGCCACGA 218 Query 288 TA---TTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCA 344 | ||| |||||||||||| || || ||| | |||||||||||||||||| |||| Sbjct 217 GCAGTTCTTCGAGCCAGCGGATGCCGTCGAAGTCGAGGTGGTTGGTCGGTTCGTCAAGCA 158 Query 345 ACAGCACTTCAGG 357 ||| || || || Sbjct 157 GCAGGACATCGGG 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1880247793452