Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AAMG01001416.1 Length=341 Score E Sequences producing significant alignments: (Bits) Value seq1684 80.6 5e-13 >seq1684 Length=16873 Score = 80.6 bits (88), Expect = 5e-13 Identities = 116/161 (72%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 22 CGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGATGGTGGCGACAAACGCCACGGC 81 ||||| || || ||||| || |||| ||||| | |||||||| || |||||||| Sbjct 1675 CGGCAGAAAGACGAGGTTCGCGAAAGCCAGACCGTAAAGCGTGGCGACGAAGGCCACGGC 1616 Query 82 AATGCCGCTGCCC-AGTTGCGAAGGGTCGGCGAGGTTGCCCATCACGTGGATCAGGCCCA 140 |||||| | |||| || | || ||| ||| || | ||| | || || || || || | Sbjct 1615 AATGCC-CGGCCCGAGCTCCGCAGGCTCGATCAGATGCCCCGTGACCTGAATAAGACCGA 1557 Query 141 TCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCCC 181 ||||| |||| ||||||| || ||||| ||||||||| Sbjct 1556 GCACCGAGCCGAGAATGCCGAACGTGGGCGCATAGCCGCCC 1516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988110934944