Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq3462 179 6e-43 >seq3462 Length=7323 Score = 179 bits (198), Expect = 6e-43 Identities = 211/284 (74%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 1 TACGCCTTGCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCT 60 ||| || || |||||| || ||||||| |||||||| | | |||| | | | || || Sbjct 3873 TACACCATGAAGCCGCTCGACTTCGCGGCGTTCCCGA-GCGTGCTGCTGTTCTCCACGCT 3931 Query 61 GCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGG 120 || || || | ||||||| ||||||||||| || ||| ||||| | ||||| ||| Sbjct 3932 CCTGCGCCTCTCGCTGAACGTGGCCTCCACGCGCGTCGTGCTGCTCGAAGGCCACACCGG 3991 Query 121 CCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTA 180 || | ||| ||||| |||||||| || | ||||| | | | | ||||| |||| Sbjct 3992 CCCGGGCGCCGCCGGCCAGGTGATCGAGTCGTTCGGCCACTTCCTCGTGGGCGGCAACTT 4051 Query 181 CGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAA 240 || ||||||||||||||||||| |||||| ||| |||||||||| ||||| | || || Sbjct 4052 CGCCGTCGGTATCGTGGTGTTCGTGATCCTCATGGTCATCAACTTCATGGTGATCACGAA 4111 Query 241 GGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 |||||| || ||||| |||| ||| |||||| || || |||| Sbjct 4112 GGGCGCGGGCCGGATCGCCGAAGTGTCCGCGCGCTTCACGCTCG 4155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 809053444859