Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq10454 122 1e-25 >seq10454 Length=1298 Score = 122 bits (134), Expect = 1e-25 Identities = 147/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 96 GCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACC 155 || |||||||| |||| | ||||| || || || || ||||||| || || || || Sbjct 888 GCGAGGAAGGCCTCTT-GCGGAATCTCGACCGAACCGACCTGCTTCATCCGCTTCTTGCC 946 Query 156 GGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGC 215 |||| ||||| || |||||||| ||| || | | ||| ||||||||||| ||||| Sbjct 947 TTCCTTCTGCTTTTCGAGCAGCTTCTTCTTGCGCGTGATGTCGCCGCCGTAGCACTTGGC 1006 Query 216 CAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGC 275 ||| |||||||| | || ||||||| | ||||| ||||| ||| |||| || || Sbjct 1007 CAGCACGTTCTTGCGCAGCGCCTTGATGTTCTCGCGCGCGATGATGTGCGCGCCGATTGC 1066 Query 276 GGCCTGGATCGCGACGTCG 294 |||||| || || |||||| Sbjct 1067 GGCCTGAATGGCCACGTCG 1085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 841031841889