Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq4612 172 1e-40 seq6269 163 6e-38 >seq4612 Length=5060 Score = 172 bits (190), Expect = 1e-40 Identities = 205/273 (75%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 77 AGGCCGAACAGGCGCTCCTTGATGATTCCATCGCGCTCGTTCCACAGGGCCAG-GCCCAG 135 ||||| ||||| |||||||| | || ||| | |||||||||| || || | || Sbjct 1235 AGGCCAAACAGACGCTCCTTCAAAATCGGGTCGAGGCCGTTCCACAGCGCGAGCGAACAA 1294 Query 136 GCACCAACGTTGCGCCTTGTCACTGAACCCCGCCAGGCCGTCCTCGCCCCAACGGTAGGC 195 ||||| || || ||| ||| || ||||| ||||| |||||||| || ||||| Sbjct 1295 -CACCAGTCCAGCCGCTCGTCGGCGAAACCGGCCAGACCGTCTTCGCCCCAGCGATAGGC 1353 Query 196 GCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCCCAGGCGTCGCCATCGGCGCTGTAGTC 255 ||| |||| |||||||| || ||||||||| |||| ||| ||| | |||| ||||| Sbjct 1354 GCGCATGCGCGCATGGTCGTGCGGGAAGTAGTCCCACGCGGTGCCGTGCTCGCTATAGTC 1413 Query 256 TTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGGTAGGGGCCCCACTCGC-GCCAGCGCT 314 ||||||||||||||||||||||||||||| ||||| || ||||| ||| ||||||| Sbjct 1414 CTCGCGCACCGTGCCCCATTGGCGTTCGCTGAGGTACGGTCCCCA-GCGCTGCCAGCGGG 1472 Query 315 CGGCGTCGCTGGTTGCCAGGCGTTGGCCTTCGA 347 || |||| | ||||||||||||||||| Sbjct 1473 CGTAGTCGGCCGAGTACAGGCGTTGGCCTTCGA 1505 >seq6269 Length=3128 Score = 163 bits (180), Expect = 6e-38 Identities = 203/277 (73%), Gaps = 1/277 (0%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || ||||| ||||| | || ||| ||| ||| ||||| |||||||| | ||| ||| Sbjct 1217 TCGCCGTGATTGCCTTGCGCATTGGTCAAGCCAAACAGCCGCTCCTTCAGGATGGGGTCG 1276 Query 110 CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGCC 169 ||| ||||||| || || || || |||||| | | | || | ||| || || Sbjct 1277 CGCCCGTTCCAGAGCGCGAGCGACACGCACCAGTCGAGTGGGTCGTTGCCGAATCCGGCA 1336 Query 170 AGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCC 229 | ||||||||||||||| ||||| ||||||||| ||||| || |||||||| || || Sbjct 1337 ATGCCGTCCTCGCCCCAGCGGTACATGCGGCTGCGCGCATGCTCGTGGGGGAAATACTCC 1396 Query 230 CAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGG 289 || ||| || | | |||||||||||||||| || |||||||| || || || ||||| Sbjct 1397 CATGCGGTTCCGTAGTCGCTGTAGTCTTCGCGAACGGTGCCCCACTGCCGGTCACTCAGA 1456 Query 290 TAGGGGCCCCACTCGCGCCAGCGCTCGGCGTCGCTGG 326 || || ||||| |||||||| ||| ||| |||| Sbjct 1457 TAAGGCCCCCAGCGGCGCCAGCAGTCGAGGTC-CTGG 1492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007297555040