Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq9801 104 1e-16 seq9495 89.7 2e-12 seq513 89.7 2e-12 >seq9801 Length=1421 Score = 104 bits (114), Expect = 1e-16 Identities = 124/166 (75%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 |||||||||| || || |||||||| ||| || | |||||||||||||| || || Sbjct 677 CTCGAGCAACTTGCCGACCGTCATGCGGCTGGGGAAGCCGTGCGGGTTCATGATCATATC 618 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGAC 449106 ||| | |||| | ||||||||||||| || | || || | ||||||| ||| Sbjct 617 GGGGCACATGCCGCGCTCGTTGAAGGGCATATCGACTCCATTCACAATCAGGCCGACGAC 558 Query 449107 GCCCTTCTGGCCGTGGCG-GCTGCAGAACTTGTCCCCCTGCTCGGG 449151 ||||||||| ||||| || | || |||||||||| ||| | ||||| Sbjct 557 GCCCTTCTGTCCGTGACGTGATG-AGAACTTGTCACCCGGTTCGGG 513 >seq9495 Length=1495 Score = 89.7 bits (98), Expect = 2e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 |||||||| || || ||| || ||||| ||||||| ||| ||| |||| | | Sbjct 635 GTCATGCGGGAGGGAATGGCGTGGGGGTTGATGATGAGGTCCGGCACGATGCCGTCGCGG 694 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||||| || | | | ||||||| |||||| || ||||||||| Sbjct 695 TTGAAGGGCATGTCCTCCTGGCGAAACTGGATGCCGTTGGTGCCCTTTTGTCCGTGGCGG 754 Query 449126 CTGCAGAACTTGTCCCC 449142 |||||||| ||||| || Sbjct 755 CTGCAGAATTTGTCGCC 771 >seq513 Length=89456 Score = 89.7 bits (98), Expect = 2e-12 Identities = 108/146 (74%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 349075 GTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGC 349134 || || ||| ||||| || | |||| || |||||||||||||| || | || || || Sbjct 43264 GTTGATAATTTCCTTCAGGCGAGGCACTCCTAGGGTCACGTTCTTCGCGGACACACCAGC 43323 Query 349135 AAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAG 349194 | |||||||||| | || |||| |||||| ||||| |||||| |||| |||||| Sbjct 43324 ATAGTGGAAGGTGTTCAGTGTCATTTGCGTGGCAGGCTCTCCGATGGACTGCGCCGCGAT 43383 Query 349195 GATGCCTACCATCTCGCC-GGGCGCG 349219 | || ||||| ||||| ||| ||| Sbjct 43384 GGCACCCACCATTTCGCCTGGGTGCG 43409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2082832410229226