Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028270.1 Length=24837 Score E Sequences producing significant alignments: (Bits) Value seq667 91.5 2e-14 >seq667 Length=65911 Score = 91.5 bits (100), Expect = 2e-14 Identities = 117/160 (73%), Gaps = 5/160 (3%) Strand=Plus/Plus Query 19663 AAGATATATTTATTAGTTATAGTATAAAATGGTAAATTATAGTAATGGTAAGGTTTATAA 19722 || ||||| | | | | |||||| ||||||||||||||| | ||| || ||||||| Sbjct 49079 AATATATAATAGTAAATAATAGTAAAAAATGGTAAATTATCAAAGTGGAAAAATTTATAA 49138 Query 19723 AGTATGGAGTTTATTAGGTAATAAAATATATATTGGTTCAACAACTAAAGAATATTTAAG 19782 | || || | | ||||| || |||||||||||||| |||||| |||||||| Sbjct 49139 AATA----GTATCAAACA-AATAAGATTTATATTGGTTCAACCACTAAAAAATATTTATT 49193 Query 19783 CCAAAGAATGGATACTCATAGACAAAATTATAAAAAATGG 19822 |||||||||||| |||||| || |||||| |||| Sbjct 49194 TCAAAGAATGGATCAACATAGAAGGAAGTATAAAGCATGG 49233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79296055208800