Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq835 159 5e-37 >seq835 Length=6782 Score = 159 bits (176), Expect = 5e-37 Identities = 176/230 (77%), Gaps = 7/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| | || | |||||| ||||||| ||||||| | Sbjct 2902 GTACAAAGGGCAGGGACATATTCAGCATAAGGTA-ATGACTTACGCTTACAAGGAATT-C 2845 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||||| || ||| |||| ||| |||| ||||| | ||| |||| ||||| |||| Sbjct 2844 CTCGTTGATGATCAATAATTACAAAGATCAATCCCAGTTACGTAGAAAATTCAATTGATT 2785 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| ||| | ||| | || ||| | | || ||||||||||||||| Sbjct 2784 ACCCAATCCTTCCGGACCAGG----AACCTTTTTGCTTTCTACATTGTAGCGCGCGTGCG 2729 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG 229 ||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 2728 GCCCAAGGTATCTAAGGGCATCACAGACCTGTTATTGCCTCGGACTTCCG 2679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751991054020