Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq835 80.6 1e-13 >seq835 Length=6782 Score = 80.6 bits (88), Expect = 1e-13 Identities = 92/122 (75%), Gaps = 10/122 (8%) Strand=Plus/Minus Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACA----T 55 ||| | ||| ||| ||||||||| |||||||||| | ||| | ||| | | Sbjct 2295 GAATCTAAACACTCGTGATTTCTCACAAGGTGCCGA-----TTAAACTTTTAAAAAGTTT 2241 Query 56 CGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||| Sbjct 2240 TAACCGATCCCTGGTCGACATAGTTTATAGTTTGGACTACGACGGTATCTGATCGTCTTC 2181 Query 116 GA 117 || Sbjct 2180 GA 2179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278396794920