Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq835 123 1e-25 >seq835 Length=6782 Score = 123 bits (136), Expect = 1e-25 Identities = 116/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 536 TTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCT 595 |||| | |||||||| ||||| | | ||||||||||||| ||||||||||| | Sbjct 4863 TTCGAAAAGATTTGAGGTTGAGCACATAGAATAGGACCCGAAAGATTGTGAACTATGCTT 4922 Query 596 GAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655 || | || |||||||| ||||||||||||||||||| | || | ||| ||||||||| Sbjct 4923 GAGGAAGGCGAAGCCAGGGGAAACTCTGGTGGAGGCTTGTCGCAATGCTGACGTGCAAAT 4982 Query 656 CGATCGTCAAATTTGGGTATAGGGGCGA 683 || | ||| || ||| |||||||||||| Sbjct 4983 CGCTTGTCTAACTTGAGTATAGGGGCGA 5010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079973659400