Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq393 149 2e-33 >seq393 Length=22713 Score = 149 bits (164), Expect = 2e-33 Identities = 196/270 (73%), Gaps = 14/270 (5%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||| |||| |||| ||||||||| | ||||| Sbjct 10384 GCATCTTCACGGAAAATTCAACTTCATTGAGATAATACTGGAGACAGTAGGGAAGTCGTT 10325 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| ||| |||| || |||| |||||||||||||||||||| ||||||||| | Sbjct 10324 ACACCATTCATGCGCGTCGAAAATTACTCGACAAGGAATTTCGCTACCATAGGACCGTCA 10265 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACC---CC 189 ||||| |||| ||||||| ||| |||| || | | ||| || | || || | Sbjct 10264 AGGTTACAGCCGTCGTTTACTGGGACTTCAATTCAAAACTT-GC---ATCTCTCCTTTTC 10209 Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTG 249 ||||| | | ||||||| |||| ||| ||||||||| || || | |||| Sbjct 10208 ATCAAAT-------CAGCACCGGACAGGTATCAGACCCTATACATCATGTTGCCATTTTG 10156 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 |||||| ||||||||||| ||||||||||| Sbjct 10155 CAGAGTCCTGTGTTTTTATTAAACAGTCGC 10126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260784517376