Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq393 197 3e-48 >seq393 Length=22713 Score = 197 bits (218), Expect = 3e-48 Identities = 257/353 (73%), Gaps = 12/353 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | ||| |||| ||| || | |||||||| || ||||| Sbjct 10384 GCATCTTCACGGAAAATTCAACTTCATTGAGATAATACTGGAGACAGTAGGGAAGTCGTT 10325 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| |||| |||| || |||| |||||||||||||||||||| ||||||||| | Sbjct 10324 ACACCATTCATGCGCGTCGAAAATTACTCGACAAGGAATTTCGCTACCATAGGACCGTCA 10265 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||| |||| ||||||||||| ||| | |||| ||| || ||| ||| Sbjct 10264 AGGTTACAGCCGTCGTTTACTGGGACTTCAATTCAAAACTTGCAT--CTC-------TCC 10214 Query 187 CCTT-AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245 || | | ||||||||| |||| |||| |||||||||| | |||| | || ||| Sbjct 10213 TTTTCATCAAATCAGCACCGGACAGGTATCAGACCCTATACATCATGTTGCCATTTTGCA 10154 Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACA 305 || ||||||||||| |||||||||||| || || ||| | | | | | | Sbjct 10153 GAGTCCTGTGTTTTTATTAAACAGTCGCTACCCTCTCTTTTCTTTTGACCTTTTTTCAAA 10094 Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 ||||| | ||||||| ||||||| | |||||||||||||||||||| ||||| Sbjct 10093 GGCACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTT--CAATA 10043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062386953728