Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq393 123 7e-26 >seq393 Length=22713 Score = 123 bits (136), Expect = 7e-26 Identities = 148/200 (74%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 288 GGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTA 347 ||||| || ||| | ||||| |||| ||| |||||| |||||||||| || ||| Sbjct 3823 GGAAGTTGAGGAACATGTCAAGTCATTATGGCCCTTACCGATTGGGCTACATTTGTACTA 3882 Query 348 CAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTC 407 |||||| || ||||| || ||||||| | ||| | |||||| || | ||||| | | Sbjct 3883 CAATGGTTAAAACAAAAGGAAGCGAAAGTGAGAGCTGGAGCAAAACCTAAAAAGTAAT-C 3941 Query 408 TCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAG 467 |||| ||||| |||||||||||| ||||| |||||| ||||||||||||| Sbjct 3942 AAAGTTTGGATTTGTCTCTGCAACTCGAGACAATGAAAGTGGAATTGCTAGTAATCGTAT 4001 Query 468 ATCAGCATGCTACGGTGAAT 487 ||||| | | | |||||||| Sbjct 4002 ATCAGAAGGATTCGGTGAAT 4021 Score = 89.7 bits (98), Expect = 2e-15 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||| || |||||||| | ||||||||| || || ||||| |||||| || Sbjct 3521 TACGATCGCAAGATTAAAACTCAAGGAAATTGACGGAGATTTGCGCAAGCAGTGGAGTAT 3580 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGA 104 | ||||||||||| ||| |||| || |||||||| | |||| Sbjct 3581 GAAGTTTAATTCGATATAACACGAAAAATCTTACCAATTGTTGA 3624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503981530880