Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012-
07-09] 1,228 sequences; 25,723,383 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq393 123 7e-26
>seq393
Length=22713
Score = 123 bits (136), Expect = 7e-26
Identities = 148/200 (74%), Gaps = 1/200 (1%)
Strand=Plus/Plus
Query 288 GGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTA 347
||||| || ||| | ||||| |||| ||| |||||| |||||||||| || |||
Sbjct 3823 GGAAGTTGAGGAACATGTCAAGTCATTATGGCCCTTACCGATTGGGCTACATTTGTACTA 3882
Query 348 CAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTC 407
|||||| || ||||| || ||||||| | ||| | |||||| || | ||||| | |
Sbjct 3883 CAATGGTTAAAACAAAAGGAAGCGAAAGTGAGAGCTGGAGCAAAACCTAAAAAGTAAT-C 3941
Query 408 TCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAG 467
|||| ||||| |||||||||||| ||||| |||||| |||||||||||||
Sbjct 3942 AAAGTTTGGATTTGTCTCTGCAACTCGAGACAATGAAAGTGGAATTGCTAGTAATCGTAT 4001
Query 468 ATCAGCATGCTACGGTGAAT 487
||||| | | | ||||||||
Sbjct 4002 ATCAGAAGGATTCGGTGAAT 4021
Score = 89.7 bits (98), Expect = 2e-15
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
||||| |||||| || |||||||| | ||||||||| || || ||||| |||||| ||
Sbjct 3521 TACGATCGCAAGATTAAAACTCAAGGAAATTGACGGAGATTTGCGCAAGCAGTGGAGTAT 3580
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGA 104
| ||||||||||| ||| |||| || |||||||| | ||||
Sbjct 3581 GAAGTTTAATTCGATATAACACGAAAAATCTTACCAATTGTTGA 3624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503981530880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |