Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq835 149 1e-33 >seq835 Length=6782 Score = 149 bits (164), Expect = 1e-33 Identities = 103/117 (88%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||||||||| ||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct 2539 CTAGTTAGCAGGTCGAGGTCTCGTCCGTTATCGGAATTGACCAGACAAATCGCTCCACCA 2480 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||||||| ||||||||| |||||| || | | |||||| Sbjct 2479 ACTAAGAACGACCATGCACCACCACTTATAGAATCATGAAAGATCTCTTAGTCTGTC 2423 Score = 107 bits (118), Expect = 3e-21 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2746 CATTGTAGCGCGCGTGCGGCCCAAGGTATCTAAGGGCATCACAGACCTGTTATTGCCTCG 2687 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||||| ||| || || |||||||||||||||| Sbjct 2686 GACTTCCGCCTGCTTGAGGCAGGTAGTCCCTCTAAGAAG 2648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796790521068