Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq393 87.8 2e-15 >seq393 Length=22713 Score = 87.8 bits (96), Expect = 2e-15 Identities = 105/147 (71%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | | || || |||||||||| || | | ||| |||| |||| Sbjct 10413 GGGTCTTTCCGTCTAACTGTAAATATTCCGCATCTTCACGGAAAATTCAACTTCATTGAG 10354 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | | ||||||| |||||||||| ||| |||| || |||| ||| Sbjct 10353 ATAATACTGGAGACAGTAGGGAAGTCGTTACACCATTCATGCGCGTCGAAAATTACTCGA 10294 Query 145 CAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||| ||||||||| Sbjct 10293 CAAGGAATTTCGCTACCATAGGACCGT 10267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547193490372