Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq393 93.3 8e-17 >seq393 Length=22713 Score = 93.3 bits (102), Expect = 8e-17 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 5 TCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGT 64 |||||| |||||| || | |||||||| |||||| || |||||| ||||| | |||| Sbjct 3061 TCGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCTCACTGCAGCCTCT--TTCGAGT 3004 Query 65 CTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTC 124 ||| | | | ||| | ||||||||| | ||| |||| || | |||| ||| | Sbjct 3003 TTGGCCTTTTTTTCAATGCCAATGTGGATGATCATCCTCCCAAATCACCTACGAATCCTT 2944 Query 125 GGCTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||||| || ||| || |||||||||||||| Sbjct 2943 GGCTTGGTAAGCCTTTACCTTACCAACTACCTAAT 2909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998387739648