Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq393 89.7 9e-16 >seq393 Length=22713 Score = 89.7 bits (98), Expect = 9e-16 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 |||||| |||||||| |||||| | || |||| ||||||| ||| ||| |||||||| Sbjct 3219 CCTACATACCCTTTACGCCCAATTCTTACGAATAATGCTTGCCCCCTCCGTTTTACCGCG 3160 Query 251 GCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||| | ||||||| | ||| ||| Sbjct 3159 GCTGCTGGCACGAAATTAGCCGGGACTTTTTC 3128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828790140388