Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq393 105 1e-20 >seq393 Length=22713 Score = 105 bits (116), Expect = 1e-20 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 80 AACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCA 139 || || | ||||| || | | || || | ||||||||||||||| | |||| || | Sbjct 11028 AATTGATACACCATAGATCTATCTTTCTCAGTCCTCTCGTACTAAAGTCAGCATTTCGTA 10969 Query 140 AATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCT 199 |||| || | |||||||||||||||||||| ||||||||| ||||||||| Sbjct 10968 TTTTTCTATATTTTACAGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCT 10909 Query 200 CGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATG 259 | ||| || ||||| | ||||| | |||||||| | || |||| | |||||| Sbjct 10908 CACGTACCATTTTAAACGCTGAACACGCGTACCCTTGGAAACTTTTTCAACTCCAGGACA 10849 Query 260 AGACGAGCCGACATCG 275 || |||||||||||| Sbjct 10848 TGATGAGCCGACATCG 10833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780790711408