Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq393 118 3e-24 >seq393 Length=22713 Score = 118 bits (130), Expect = 3e-24 Identities = 131/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80 ||||||| |||| || || |||| |||||||||||||||||||| ||||||||| ||| Sbjct 3080 CTTCTTCCCTCACGTGGTATCGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCTCAC 3021 Query 81 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTC 140 ||| |||| | | |||| ||| | | | ||| | ||| ||||| || |||||||| | Sbjct 3020 TGCAGCCT--CTTTCGAGTTTGGCCTTTTTTTCAATGCCAATGTGGATGATCATCCTCCC 2963 Query 141 AGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 | | || ||| | ||| | | || ||| ||| ||||| ||||||| ||||| Sbjct 2962 AAATCACCTACGAATCCTTGGCTTGGTAAGCCTTTACCTTACCAACTACCTAAT 2909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222384988928