Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq393 131 4e-28 >seq393 Length=22713 Score = 131 bits (144), Expect = 4e-28 Identities = 232/332 (70%), Gaps = 10/332 (3%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||| ||||||||| | |||||||||||||||||||| ||| ||||||| ||| |||| || Sbjct 3132 AAGTCCCGGCTAATTTCGTGCCAGCAGCCGCGGTAAAACGGAGGGGGCAAGCATTATTCG 3191 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA---GTCAGAGGTGAAAGGCTA 129 || | |||||||||||||| |||||| |||| | || ||| | || |||||| Sbjct 3192 TAAGAATTGGGCGTAAAGGGTATGTAGGTTGTTTTTAAAAAGGTCTTATGTAAAAGGCAC 3251 Query 130 TGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCA--GGAGGGGCAAGT 187 || | | || || | ||| | ||||||| | ||| | |||| | Sbjct 3252 TGAAAAGAAGAAGTGAAAGCATAAAGAACAAGAAAACTAGAGTAAAATGGATGTGCAA-T 3310 Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTA-GATATTAGGAGGAACACCAG-TGGCGAAG 245 |||| ||| | || ||| |||| || | || | ||| || ||| ||||| | Sbjct 3311 AGAATAACTAAAGGAGAGGTAAAATTCGCATGAGAATAGTTAGACTGACAGTTGGCGTAA 3370 Query 246 GCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTA 305 || || || | |||||||||||| |||| || | ||||||||||||||||| Sbjct 3371 GC--AAAGCACAACAGATACTGACACTGAGATACGAAGGCATAGGGAGCAAACAGGATTA 3428 Query 306 GATACCCTGGTAGTCCACGCCGTAAACGATGA 337 || |||||||||||| | || ||||||||||| Sbjct 3429 GAGACCCTGGTAGTCTATGCAGTAAACGATGA 3460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203185224704