Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012-
07-09] 1,228 sequences; 25,723,383 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq393 131 4e-28
>seq393
Length=22713
Score = 131 bits (144), Expect = 4e-28
Identities = 232/332 (70%), Gaps = 10/332 (3%)
Strand=Plus/Plus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
||| ||||||||| | |||||||||||||||||||| ||| ||||||| ||| |||| ||
Sbjct 3132 AAGTCCCGGCTAATTTCGTGCCAGCAGCCGCGGTAAAACGGAGGGGGCAAGCATTATTCG 3191
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA---GTCAGAGGTGAAAGGCTA 129
|| | |||||||||||||| |||||| |||| | || ||| | || ||||||
Sbjct 3192 TAAGAATTGGGCGTAAAGGGTATGTAGGTTGTTTTTAAAAAGGTCTTATGTAAAAGGCAC 3251
Query 130 TGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCA--GGAGGGGCAAGT 187
|| | | || || | ||| | ||||||| | ||| | |||| |
Sbjct 3252 TGAAAAGAAGAAGTGAAAGCATAAAGAACAAGAAAACTAGAGTAAAATGGATGTGCAA-T 3310
Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTA-GATATTAGGAGGAACACCAG-TGGCGAAG 245
|||| ||| | || ||| |||| || | || | ||| || ||| ||||| |
Sbjct 3311 AGAATAACTAAAGGAGAGGTAAAATTCGCATGAGAATAGTTAGACTGACAGTTGGCGTAA 3370
Query 246 GCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTA 305
|| || || | |||||||||||| |||| || | |||||||||||||||||
Sbjct 3371 GC--AAAGCACAACAGATACTGACACTGAGATACGAAGGCATAGGGAGCAAACAGGATTA 3428
Query 306 GATACCCTGGTAGTCCACGCCGTAAACGATGA 337
|| |||||||||||| | || |||||||||||
Sbjct 3429 GAGACCCTGGTAGTCTATGCAGTAAACGATGA 3460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203185224704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |