Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq835 179 7e-43 >seq835 Length=6782 Score = 179 bits (198), Expect = 7e-43 Identities = 199/260 (77%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| | || |||||| | |||||| |||||||||||||||||||| Sbjct 2648 CTTCTTAGAGGGACTACCTGCCTCAAGCAGGCGGAAGTCCGAGGCAATAACAGGTCTGTG 2707 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACAGAGCCAACGAGTTCATC 189 |||||||||||| |||||||||||||||||||| || | | ||| || ||| Sbjct 2708 ATGCCCTTAGATACCTTGGGCCGCACGCGCGCTACAATGTAGAAAGCAAAAAGGTT---- 2763 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGT-CGTGCTGGGGATAGAGCAT 248 ||| | |||||||| ||||||||| || || | | | ||| ||||| || | | Sbjct 2764 -CCTGGTCCGGAAGGATTGGGTAATC-AATTGAATTTTCTACGTAACTGGGATTGATCTT 2821 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||||||| || |||||||||||| ||| ||||||| ||||| | | | ||| Sbjct 2822 TGTAATTATTGATCATCAACGAGGAATTCCTTGTAAGCGTAAGTCATTACCTTATGCTGA 2881 Query 309 TTACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 2882 ATATGTCCCTGCCCTTTGTA 2901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947188368384