Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq835 410 4e-112 >seq835 Length=6782 Score = 410 bits (454), Expect = 4e-112 Identities = 268/295 (91%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| |||||||||||| | | |||| | ||| || |||||||||||||||||| Sbjct 6649 CTCCCACCTATTCTACACCTTTTAGGTCACTATGCAATATCAGACTAGAGTCAAGCTCAA 6590 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||| || || | |||||||||| | || ||||||||||| Sbjct 6589 CAGGGTCTTCTTTCCCCGCTGTTTTTGCTAGGCCCGTTCCCCTAGCAGTGGTTTCGCTGT 6530 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 6529 ATAGTAGTTAGGGACAGTGGGAATCTCATTGATCCATTCATGCGCGTCACTAATTAGATG 6470 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 6469 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGTGCTAGG 6410 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6409 TTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 6355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635179919744