Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq393 102 2e-19 >seq393 Length=22713 Score = 102 bits (112), Expect = 2e-19 Identities = 153/214 (71%), Gaps = 9/214 (4%) Strand=Plus/Minus Query 67 TTTTATTCCCTTAT-AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTT 125 |||| |||||||| |||||| |||||| | || |||| ||| ||||| | Sbjct 3114 TTTTTCTCCCTTATTAAAAGAGGTTTACGCTT--TA----CTTCTTCCCTCACGTGGTAT 3061 Query 126 GGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTT 185 ||||| |||| || || |||||| ||||||||||||||||| |||| | | ||||| Sbjct 3060 CGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCTCACTGCAGCCT--CTTTCGAGTT 3003 Query 186 TGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAG 245 ||| | | | ||| | ||||||||| || | ||||| || | | |||| ||| | | Sbjct 3002 TGGCCTTTTTTTCAATGCCAATGTGGATGATCATCCTCCCAAATCACCTACGAATCCTTG 2943 Query 246 GCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| ||| ||| ||||| || |||||||||| Sbjct 2942 GCTTGGTAAGCCTTTACCTTACCAACTACCTAAT 2909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068786875136